"Thomson Reuters, maker of the EndNote bibliographic software, is suing George Mason University and the State of Virginia...The issue is Zotero, an open source bibliographic tool that appears to rapidly increase its market share, as it is much lighter, platform independent, browser plugable and free. Of course, this is not the official reason,
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JabRef is one you might like to take a look at once your loathing reaches critical mass:
http://jabref.sourceforge.net/
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I use jabref for a few years already and happy with the outcome. It is being developed even more. Never thought about commercial bibliographical software.
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